Detailed information of SNP:
|
SNP ID:
sf0326810282(Gbrowse)
Chromosome: chr03 Position: 26810282 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 53.95% | 46.05% |
| All Indica | 798 | 84.21% | 15.79% |
| All Japonica | 497 | 0.80% | 99.20% |
| Aus | 67 | 97.01% | 2.99% |
| Indica I | 374 | 85.56% | 14.44% |
| Indica II | 213 | 93.90% | 6.10% |
| Indica Intermediate | 211 | 72.04% | 27.96% |
| Temperate Japonica | 335 | 0.30% | 99.70% |
| Tropical Japonica | 94 | 1.06% | 98.94% |
| Japonica Intermediate | 68 | 2.94% | 97.06% |
| Group VI/Aromatic | 14 | 42.86% | 57.14% |
| Intermediate | 42 | 42.86% | 57.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0326810282 | A->G | INTERGENIC | None |