Detailed information of SNP:
|
SNP ID:
sf0327575359(Gbrowse)
Chromosome: chr03 Position: 27575359 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1337 | 96.34% | 3.66% |
| All Indica | 724 | 93.65% | 6.35% |
| All Japonica | 491 | 99.80% | 0.20% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 337 | 100.00% | 0.00% |
| Indica II | 196 | 89.80% | 10.20% |
| Indica Intermediate | 191 | 86.39% | 13.61% |
| Temperate Japonica | 331 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 66 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 95.12% | 4.88% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0327575359 | G->T | INTERGENIC | None |