Detailed information of SNP:



SNP ID: sf0327780406(Gbrowse)

Chromosome: chr03

Position: 27780406
Major allele: G

Minor allele: T

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1392 93.61% 6.39%
All Indica775 89.03% 10.97%
All Japonica496 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II189 60.32% 39.68%
Indica Intermediate211 95.26% 4.74%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate67 100.00% 0.00%
Group VI/Aromatic13 92.31% 7.69%
Intermediate41 92.68% 7.32%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0327780406 G->T INTERGENIC None