Detailed information of SNP:
|
SNP ID:
sf0329844512(Gbrowse)
Chromosome: chr03 Position: 29844512 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1322 | 95.69% | 4.31% |
| All Indica | 705 | 91.91% | 8.09% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 331 | 86.40% | 13.60% |
| Indica II | 190 | 100.00% | 0.00% |
| Indica Intermediate | 184 | 93.48% | 6.52% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0329844512 | G->A | INTERGENIC | None |