Detailed information of SNP:
|
SNP ID:
sf0329918818(Gbrowse)
Chromosome: chr03 Position: 29918818 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1324 | 96.15% | 3.85% |
| All Indica | 708 | 92.94% | 7.06% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 332 | 92.17% | 7.83% |
| Indica II | 181 | 92.27% | 7.73% |
| Indica Intermediate | 195 | 94.87% | 5.13% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 38 | 97.37% | 2.63% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0329918818 | A->G | INTERGENIC | None |