Detailed information of SNP:
SNP ID:
sf0330288653(Gbrowse)
Chromosome: chr03 Position: 30288653 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1415 | 99.22% | 0.78% |
All Indica | 799 | 100.00% | 0.00% |
All Japonica | 493 | 97.97% | 2.03% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 335 | 99.70% | 0.30% |
Tropical Japonica | 91 | 90.11% | 9.89% |
Japonica Intermediate | 67 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0330288653 | A->G | INTERGENIC | None |