Detailed information of SNP:



SNP ID: sf0330288653(Gbrowse)

Chromosome: chr03

Position: 30288653
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1415 99.22% 0.78%
All Indica799 100.00% 0.00%
All Japonica493 97.97% 2.03%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 99.70% 0.30%
Tropical Japonica91 90.11% 9.89%
Japonica Intermediate67 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0330288653 A->G INTERGENIC None