Detailed information of SNP:
SNP ID:
sf0330919723(Gbrowse)
Chromosome: chr03 Position: 30919723 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1418 | 55.57% | 44.43% |
All Indica | 799 | 86.98% | 13.02% |
All Japonica | 497 | 0.40% | 99.60% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 98.13% | 1.87% |
Indica II | 213 | 65.26% | 34.74% |
Indica Intermediate | 211 | 89.10% | 10.90% |
Temperate Japonica | 335 | 0.30% | 99.70% |
Tropical Japonica | 94 | 0.00% | 100.00% |
Japonica Intermediate | 68 | 1.47% | 98.53% |
Group VI/Aromatic | 14 | 14.29% | 85.71% |
Intermediate | 41 | 53.66% | 46.34% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0330919723 | A->G | INTERGENIC | None |