Detailed information of SNP:
|
SNP ID:
sf0331260647(Gbrowse)
Chromosome: chr03 Position: 31260647 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1368 | 96.78% | 3.22% |
| All Indica | 749 | 94.26% | 5.74% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 349 | 94.56% | 5.44% |
| Indica II | 204 | 93.63% | 6.37% |
| Indica Intermediate | 196 | 94.39% | 5.61% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0331260647 | G->A | INTERGENIC | None |