Detailed information of SNP:
|
SNP ID:
sf0331553212(Gbrowse)
Chromosome: chr03 Position: 31553212 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1410 | 97.94% | 2.06% |
| All Indica | 796 | 98.62% | 1.38% |
| All Japonica | 491 | 96.74% | 3.26% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 375 | 98.67% | 1.33% |
| Indica II | 211 | 98.58% | 1.42% |
| Indica Intermediate | 210 | 98.57% | 1.43% |
| Temperate Japonica | 329 | 96.96% | 3.04% |
| Tropical Japonica | 94 | 94.68% | 5.32% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0331553212 | A->G | INTERGENIC | None |