Detailed information of SNP:
|
SNP ID:
sf0332911353(Gbrowse)
Chromosome: chr03 Position: 32911353 |
Major allele:
G
Minor allele: C Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of C(minor allele) |
|---|---|---|---|
| All | 1395 | 95.99% | 4.01% |
| All Indica | 795 | 95.85% | 4.15% |
| All Japonica | 477 | 96.02% | 3.98% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 210 | 86.67% | 13.33% |
| Indica Intermediate | 210 | 97.62% | 2.38% |
| Temperate Japonica | 323 | 95.36% | 4.64% |
| Tropical Japonica | 90 | 96.67% | 3.33% |
| Japonica Intermediate | 64 | 98.44% | 1.56% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 90.48% | 9.52% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0332911353 | G->C | INTERGENIC | None |