Detailed information of SNP:
|
SNP ID:
sf0333327005(Gbrowse)
Chromosome: chr03 Position: 33327005 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1417 | 91.32% | 8.68% |
| All Indica | 797 | 92.97% | 7.03% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 2.99% | 97.01% |
| Indica I | 375 | 95.47% | 4.53% |
| Indica II | 213 | 97.65% | 2.35% |
| Indica Intermediate | 209 | 83.73% | 16.27% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0333327005 | A->G | INTERGENIC | None |