Detailed information of SNP:



SNP ID: sf0334725566(Gbrowse)

Chromosome: chr03

Position: 34725566
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1411 53.72% 46.28%
All Indica792 21.97% 78.03%
All Japonica497 99.80% 0.20%
Aus67 74.63% 25.37%
Indica I372 5.11% 94.89%
Indica II212 35.38% 64.62%
Indica Intermediate208 38.46% 61.54%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 58.54% 41.46%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0334725566 G->A INTERGENIC None