Detailed information of SNP:
|
SNP ID:
sf0334978014(Gbrowse)
Chromosome: chr03 Position: 34978014 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1419 | 94.36% | 5.64% |
| All Indica | 799 | 94.74% | 5.26% |
| All Japonica | 497 | 99.20% | 0.80% |
| Aus | 67 | 58.21% | 41.79% |
| Indica I | 375 | 95.47% | 4.53% |
| Indica II | 213 | 93.90% | 6.10% |
| Indica Intermediate | 211 | 94.31% | 5.69% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 96.81% | 3.19% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 85.71% | 14.29% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0334978014 | G->A | INTERGENIC | None |