Detailed information of SNP:



SNP ID: sf0335239000(Gbrowse)

Chromosome: chr03

Position: 35239000
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1416 73.02% 26.98%
All Indica796 57.79% 42.21%
All Japonica497 100.00% 0.00%
Aus67 50.75% 49.25%
Indica I373 78.02% 21.98%
Indica II213 38.50% 61.50%
Indica Intermediate210 41.43% 58.57%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 69.05% 30.95%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0335239000 A->G INTERGENIC None