Detailed information of SNP:



SNP ID: sf0407003631(Gbrowse)

Chromosome: chr04

Position: 7003631
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1418 66.01% 33.99%
All Indica798 45.61% 54.39%
All Japonica497 99.80% 0.20%
Aus67 46.27% 53.73%
Indica I375 20.00% 80.00%
Indica II213 69.48% 30.52%
Indica Intermediate210 67.14% 32.86%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 64.29% 35.71%
Intermediate42 85.71% 14.29%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0407003631 A->G INTERGENIC None