Detailed information of SNP:



SNP ID: sf0411141319(Gbrowse)

Chromosome: chr04

Position: 11141319
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1414 73.06% 26.94%
All Indica797 63.11% 36.89%
All Japonica497 99.80% 0.20%
Aus66 1.52% 98.48%
Indica I375 81.07% 18.93%
Indica II213 55.40% 44.60%
Indica Intermediate209 38.76% 61.24%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic12 66.67% 33.33%
Intermediate42 59.52% 40.48%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0411141319 G->A INTERGENIC None