Detailed information of SNP:



SNP ID: sf0412071065(Gbrowse)

Chromosome: chr04

Position: 12071065
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1388 90.92% 9.08%
All Indica799 99.50% 0.50%
All Japonica468 75.64% 24.36%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 98.12% 1.88%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica318 93.71% 6.29%
Tropical Japonica86 10.47% 89.53%
Japonica Intermediate64 73.44% 26.56%
Group VI/Aromatic14 100.00% 0.00%
Intermediate40 80.00% 20.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0412071065 G->A INTERGENIC None