Detailed information of SNP:



SNP ID: sf0413183063(Gbrowse)

Chromosome: chr04

Position: 13183063
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1415 97.88% 2.12%
All Indica795 96.35% 3.65%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I371 96.23% 3.77%
Indica II213 95.77% 4.23%
Indica Intermediate211 97.16% 2.84%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0413183063 G->A INTERGENIC None