Detailed information of SNP:



SNP ID: sf0415137809(Gbrowse)

Chromosome: chr04

Position: 15137809
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1398 97.93% 2.07%
All Indica799 99.87% 0.13%
All Japonica477 94.55% 5.45%
Aus66 100.00% 0.00%
Indica I375 99.73% 0.27%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica316 92.09% 7.91%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate67 98.51% 1.49%
Group VI/Aromatic14 85.71% 14.29%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0415137809 C->T INTERGENIC None