Detailed information of SNP:



SNP ID: sf0416807036(Gbrowse)

Chromosome: chr04

Position: 16807036
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1413 97.03% 2.97%
All Indica795 94.84% 5.16%
All Japonica496 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I373 89.81% 10.19%
Indica II211 100.00% 0.00%
Indica Intermediate211 98.58% 1.42%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica93 98.92% 1.08%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0416807036 G->A INTERGENIC None