Detailed information of SNP:



SNP ID: sf0420384350(Gbrowse)

Chromosome: chr04

Position: 20384350
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1377 93.46% 6.54%
All Indica798 99.75% 0.25%
All Japonica459 83.01% 16.99%
Aus67 100.00% 0.00%
Indica I375 99.73% 0.27%
Indica II213 100.00% 0.00%
Indica Intermediate210 99.52% 0.48%
Temperate Japonica324 94.14% 5.86%
Tropical Japonica79 62.03% 37.97%
Japonica Intermediate56 48.21% 51.79%
Group VI/Aromatic12 50.00% 50.00%
Intermediate41 90.24% 9.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0420384350 G->A INTERGENIC None