Detailed information of SNP:
SNP ID:
sf0423081710(Gbrowse)
Chromosome: chr04 Position: 23081710 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1414 | 79.14% | 20.86% |
All Indica | 794 | 63.35% | 36.65% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 98.51% | 1.49% |
Indica I | 374 | 36.90% | 63.10% |
Indica II | 210 | 86.19% | 13.81% |
Indica Intermediate | 210 | 87.62% | 12.38% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0423081710 | G->A | INTERGENIC | None |