Detailed information of SNP:
SNP ID:
sf0423128904(Gbrowse)
Chromosome: chr04 Position: 23128904 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1419 | 85.48% | 14.52% |
All Indica | 799 | 74.97% | 25.03% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 98.51% | 1.49% |
Indica I | 375 | 99.20% | 0.80% |
Indica II | 213 | 24.41% | 75.59% |
Indica Intermediate | 211 | 82.94% | 17.06% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 88.10% | 11.90% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0423128904 | A->G | INTERGENIC | None |