Detailed information of SNP:
|
SNP ID:
sf0424754066(Gbrowse)
Chromosome: chr04 Position: 24754066 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1400 | 99.14% | 0.86% |
| All Indica | 796 | 99.87% | 0.13% |
| All Japonica | 482 | 97.72% | 2.28% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 100.00% | 0.00% |
| Indica II | 213 | 99.53% | 0.47% |
| Indica Intermediate | 209 | 100.00% | 0.00% |
| Temperate Japonica | 323 | 100.00% | 0.00% |
| Tropical Japonica | 91 | 89.01% | 10.99% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0424754066 | G->A | INTERGENIC | None |