Detailed information of SNP:



SNP ID: sf0429565110(Gbrowse)

Chromosome: chr04

Position: 29565110
Major allele: G

Minor allele: C

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of C(minor allele)
All1397 90.41% 9.59%
All Indica777 82.88% 17.12%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I367 84.47% 15.53%
Indica II210 89.05% 10.95%
Indica Intermediate200 73.50% 26.50%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0429565110 G->C INTERGENIC None