Detailed information of SNP:



SNP ID: sf0429756116(Gbrowse)

Chromosome: chr04

Position: 29756116
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 82.17% 17.83%
All Indica799 69.34% 30.66%
All Japonica497 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I375 80.27% 19.73%
Indica II213 33.80% 66.20%
Indica Intermediate211 85.78% 14.22%
Temperate Japonica335 99.70% 0.30%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 83.33% 16.67%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0429756116 G->A INTERGENIC None