Detailed information of SNP:
|
SNP ID:
sf0431392127(Gbrowse)
Chromosome: chr04 Position: 31392127 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 95.06% | 4.94% |
| All Indica | 798 | 95.49% | 4.51% |
| All Japonica | 497 | 93.56% | 6.44% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 375 | 95.47% | 4.53% |
| Indica II | 212 | 94.81% | 5.19% |
| Indica Intermediate | 211 | 96.21% | 3.79% |
| Temperate Japonica | 335 | 91.04% | 8.96% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0431392127 | G->A | INTERGENIC | None |