Detailed information of SNP:



SNP ID: sf0431448516(Gbrowse)

Chromosome: chr04

Position: 31448516
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1401 97.00% 3.00%
All Indica797 98.37% 1.63%
All Japonica484 94.01% 5.99%
Aus65 100.00% 0.00%
Indica I373 96.51% 3.49%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica329 93.01% 6.99%
Tropical Japonica93 97.85% 2.15%
Japonica Intermediate62 93.55% 6.45%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0431448516 A->G INTERGENIC None