Detailed information of SNP:



SNP ID: sf0431838437(Gbrowse)

Chromosome: chr04

Position: 31838437
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1418 92.74% 7.26%
All Indica798 87.34% 12.66%
All Japonica497 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I375 91.20% 8.80%
Indica II213 84.51% 15.49%
Indica Intermediate210 83.33% 16.67%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0431838437 A->G INTERGENIC None