Detailed information of SNP:
|
SNP ID:
sf0432023265(Gbrowse)
Chromosome: chr04 Position: 32023265 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1413 | 97.52% | 2.48% |
| All Indica | 796 | 98.12% | 1.88% |
| All Japonica | 494 | 95.95% | 4.05% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 97.06% | 2.94% |
| Indica II | 211 | 99.05% | 0.95% |
| Indica Intermediate | 211 | 99.05% | 0.95% |
| Temperate Japonica | 335 | 97.61% | 2.39% |
| Tropical Japonica | 92 | 95.65% | 4.35% |
| Japonica Intermediate | 67 | 88.06% | 11.94% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0432023265 | G->A | INTERGENIC | None |