Detailed information of SNP:
|
SNP ID:
sf0432052713(Gbrowse)
Chromosome: chr04 Position: 32052713 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1371 | 98.32% | 1.68% |
| All Indica | 794 | 99.12% | 0.88% |
| All Japonica | 454 | 96.48% | 3.52% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 370 | 98.11% | 1.89% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 296 | 95.27% | 4.73% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 64 | 96.88% | 3.12% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0432052713 | G->T | INTERGENIC | None |