Detailed information of SNP:
|
SNP ID:
sf0432527286(Gbrowse)
Chromosome: chr04 Position: 32527286 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1384 | 93.64% | 6.36% |
| All Indica | 791 | 98.99% | 1.01% |
| All Japonica | 473 | 84.57% | 15.43% |
| Aus | 65 | 92.31% | 7.69% |
| Indica I | 369 | 98.64% | 1.36% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 209 | 98.56% | 1.44% |
| Temperate Japonica | 324 | 86.11% | 13.89% |
| Tropical Japonica | 83 | 75.90% | 24.10% |
| Japonica Intermediate | 66 | 87.88% | 12.12% |
| Group VI/Aromatic | 13 | 92.31% | 7.69% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0432527286 | G->A | INTERGENIC | None |