Detailed information of SNP:
|
SNP ID:
sf0432695255(Gbrowse)
Chromosome: chr04 Position: 32695255 |
Major allele:
C
Minor allele: G Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1376 | 97.97% | 2.03% |
| All Indica | 792 | 99.62% | 0.38% |
| All Japonica | 465 | 94.84% | 5.16% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 369 | 99.73% | 0.27% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 210 | 99.05% | 0.95% |
| Temperate Japonica | 317 | 97.16% | 2.84% |
| Tropical Japonica | 88 | 92.05% | 7.95% |
| Japonica Intermediate | 60 | 86.67% | 13.33% |
| Group VI/Aromatic | 11 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0432695255 | C->G | INTERGENIC | None |