Detailed information of SNP:
|
SNP ID:
sf0432755360(Gbrowse)
Chromosome: chr04 Position: 32755360 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1402 | 93.51% | 6.49% |
| All Indica | 798 | 93.48% | 6.52% |
| All Japonica | 482 | 92.53% | 7.47% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 91.73% | 8.27% |
| Indica II | 213 | 93.43% | 6.57% |
| Indica Intermediate | 210 | 96.67% | 3.33% |
| Temperate Japonica | 330 | 93.03% | 6.97% |
| Tropical Japonica | 91 | 98.90% | 1.10% |
| Japonica Intermediate | 61 | 80.33% | 19.67% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 92.68% | 7.32% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0432755360 | G->A | INTERGENIC | None |