Detailed information of SNP:



SNP ID: sf0432969356(Gbrowse)

Chromosome: chr04

Position: 32969356
Major allele: A

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1417 63.02% 36.98%
All Indica799 90.74% 9.26%
All Japonica496 15.12% 84.88%
Aus67 85.07% 14.93%
Indica I375 96.00% 4.00%
Indica II213 88.26% 11.74%
Indica Intermediate211 83.89% 16.11%
Temperate Japonica335 7.46% 92.54%
Tropical Japonica93 44.09% 55.91%
Japonica Intermediate68 13.24% 86.76%
Group VI/Aromatic14 57.14% 42.86%
Intermediate41 68.29% 31.71%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0432969356 G->A INTERGENIC None