Detailed information of SNP:
|
SNP ID:
sf0433115176(Gbrowse)
Chromosome: chr04 Position: 33115176 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1408 | 97.87% | 2.13% |
| All Indica | 796 | 96.86% | 3.14% |
| All Japonica | 495 | 100.00% | 0.00% |
| Aus | 62 | 93.55% | 6.45% |
| Indica I | 375 | 97.33% | 2.67% |
| Indica II | 210 | 97.62% | 2.38% |
| Indica Intermediate | 211 | 95.26% | 4.74% |
| Temperate Japonica | 334 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0433115176 | G->A | INTERGENIC | None |