Detailed information of SNP:



SNP ID: sf0433490661(Gbrowse)

Chromosome: chr04

Position: 33490661
Major allele: G

Minor allele: T

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1386 92.14% 7.86%
All Indica799 99.75% 0.25%
All Japonica464 78.66% 21.34%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.05% 0.95%
Temperate Japonica305 70.82% 29.18%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate65 86.15% 13.85%
Group VI/Aromatic14 57.14% 42.86%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0433490661 T->G INTERGENIC None