Detailed information of SNP:



SNP ID: sf0434619869(Gbrowse)

Chromosome: chr04

Position: 34619869
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 96.69% 3.31%
All Indica799 99.75% 0.25%
All Japonica497 100.00% 0.00%
Aus67 43.28% 56.72%
Indica I375 100.00% 0.00%
Indica II213 99.53% 0.47%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 85.71% 14.29%
Intermediate42 88.10% 11.90%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0434619869 G->A INTERGENIC None