Detailed information of SNP:
|
SNP ID:
sf0514807657(Gbrowse)
Chromosome: chr05 Position: 14807657 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1403 | 95.08% | 4.92% |
| All Indica | 792 | 92.05% | 7.95% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 59 | 91.53% | 8.47% |
| Indica I | 371 | 89.49% | 10.51% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 208 | 88.46% | 11.54% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0514807657 | G->A | INTERGENIC | None |