Detailed information of SNP:



SNP ID: sf0519135770(Gbrowse)

Chromosome: chr05

Position: 19135770
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1414 75.53% 24.47%
All Indica795 60.63% 39.37%
All Japonica497 98.39% 1.61%
Aus66 83.33% 16.67%
Indica I373 72.65% 27.35%
Indica II213 47.42% 52.58%
Indica Intermediate209 52.63% 47.37%
Temperate Japonica335 98.51% 1.49%
Tropical Japonica94 96.81% 3.19%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 66.67% 33.33%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0519135770 G->A INTERGENIC None