Detailed information of SNP:



SNP ID: sf0519203422(Gbrowse)

Chromosome: chr05

Position: 19203422
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 98.59% 1.41%
All Indica799 100.00% 0.00%
All Japonica497 96.18% 3.82%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 95.82% 4.18%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 92.65% 7.35%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0519203422 C->T INTERGENIC None