Detailed information of SNP:



SNP ID: sf0526266653(Gbrowse)

Chromosome: chr05

Position: 26266653
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1229 93.65% 6.35%
All Indica614 87.30% 12.70%
All Japonica496 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I269 74.35% 25.65%
Indica II177 99.44% 0.56%
Indica Intermediate168 95.24% 4.76%
Temperate Japonica334 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate38 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0526266653 C->T INTERGENIC None