Detailed information of SNP:



SNP ID: sf0526968706(Gbrowse)

Chromosome: chr05

Position: 26968706
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1351 97.41% 2.59%
All Indica799 100.00% 0.00%
All Japonica429 91.84% 8.16%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica274 87.23% 12.77%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate61 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0526968706 C->T INTERGENIC None