Detailed information of SNP:
|
SNP ID:
sf0527737743(Gbrowse)
Chromosome: chr05 Position: 27737743 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1369 | 97.66% | 2.34% |
| All Indica | 778 | 99.61% | 0.39% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 40 | 32.50% | 67.50% |
| Indica I | 374 | 100.00% | 0.00% |
| Indica II | 212 | 99.53% | 0.47% |
| Indica Intermediate | 192 | 98.96% | 1.04% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 95.00% | 5.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0527737743 | G->A | INTERGENIC | None |