Detailed information of SNP:
|
SNP ID:
sf0600082785(Gbrowse)
Chromosome: chr06 Position: 82785 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1402 | 97.57% | 2.43% |
| All Indica | 788 | 96.45% | 3.55% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 62 | 91.94% | 8.06% |
| Indica I | 369 | 97.02% | 2.98% |
| Indica II | 211 | 94.79% | 5.21% |
| Indica Intermediate | 208 | 97.12% | 2.88% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0600082785 | G->A | INTERGENIC | None |