Detailed information of SNP:
|
SNP ID:
sf0600568740(Gbrowse)
Chromosome: chr06 Position: 568740 |
Major allele:
T
Minor allele: G Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of T(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1271 | 98.27% | 1.73% |
| All Indica | 792 | 98.48% | 1.52% |
| All Japonica | 361 | 97.51% | 2.49% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 370 | 98.38% | 1.62% |
| Indica II | 211 | 98.10% | 1.90% |
| Indica Intermediate | 211 | 99.05% | 0.95% |
| Temperate Japonica | 236 | 97.46% | 2.54% |
| Tropical Japonica | 75 | 96.00% | 4.00% |
| Japonica Intermediate | 50 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 37 | 97.30% | 2.70% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0600568740 | T->G | INTERGENIC | None |