Detailed information of SNP:
|
SNP ID:
sf0600799939(Gbrowse)
Chromosome: chr06 Position: 799939 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1377 | 98.33% | 1.67% |
| All Indica | 797 | 100.00% | 0.00% |
| All Japonica | 459 | 95.21% | 4.79% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 212 | 100.00% | 0.00% |
| Indica Intermediate | 210 | 100.00% | 0.00% |
| Temperate Japonica | 303 | 92.74% | 7.26% |
| Tropical Japonica | 91 | 100.00% | 0.00% |
| Japonica Intermediate | 65 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 97.50% | 2.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0600799939 | G->A | INTERGENIC | None |