Detailed information of SNP:
|
SNP ID:
sf0600847095(Gbrowse)
Chromosome: chr06 Position: 847095 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 77.77% | 22.23% |
| All Indica | 797 | 71.89% | 28.11% |
| All Japonica | 497 | 95.98% | 4.02% |
| Aus | 67 | 13.43% | 86.57% |
| Indica I | 375 | 74.40% | 25.60% |
| Indica II | 213 | 76.53% | 23.47% |
| Indica Intermediate | 209 | 62.68% | 37.32% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 79.79% | 20.21% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 69.05% | 30.95% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0600847095 | G->A | INTERGENIC | None |