Detailed information of SNP:



SNP ID: sf0602178234(Gbrowse)

Chromosome: chr06

Position: 2178234
Major allele: A

Minor allele: T

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of T(minor allele)
All1419 98.10% 1.90%
All Indica799 98.87% 1.13%
All Japonica497 96.78% 3.22%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 96.24% 3.76%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 85.11% 14.89%
Japonica Intermediate68 97.06% 2.94%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0602178234 A->T INTERGENIC None