Detailed information of SNP:
|
SNP ID:
sf0603518051(Gbrowse)
Chromosome: chr06 Position: 3518051 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1345 | 95.17% | 4.83% |
| All Indica | 740 | 91.62% | 8.38% |
| All Japonica | 485 | 99.79% | 0.21% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 342 | 85.96% | 14.04% |
| Indica II | 200 | 97.00% | 3.00% |
| Indica Intermediate | 198 | 95.96% | 4.04% |
| Temperate Japonica | 326 | 100.00% | 0.00% |
| Tropical Japonica | 92 | 100.00% | 0.00% |
| Japonica Intermediate | 67 | 98.51% | 1.49% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 94.87% | 5.13% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0603518051 | G->A | INTERGENIC | None |